API reference
Basic structs
FastIsostasy.ComputationDomain
— TypeComputationDomain
ComputationDomain(W, n)
ComputationDomain(Wx, Wy, Nx, Ny)
Return a struct containing all information related to geometry of the domain and potentially used parallelism. To initialize one with 2*W
and 2^n
grid cells:
Omega = ComputationDomain(W, n)
If a rectangular domain is needed, run:
Omega = ComputationDomain(Wx, Wy, Nx, Ny)
FastIsostasy.PhysicalConstants
— TypePhysicalConstants
Return a struct containing important physical constants. Comes with default values that can however be changed by the user, for instance by running:
c = PhysicalConstants(rho_ice = 0.93) # (kg/m^3)
All constants are given in SI units (kilogram, meter, second).
FastIsostasy.LayeredEarth
— TypeLayeredEarth(Omega; layer_boundaries, layer_viscosities)
Return a struct containing all information related to the lateral variability of solid-Earth parameters. To initialize with values other than default, run:
Omega = ComputationDomain(3000e3, 7)
lb = [100e3, 300e3]
lv = [1e19, 1e21]
p = LayeredEarth(Omega, layer_boundaries = lb, layer_viscosities = lv)
which initializes a lithosphere of thickness $T_1 = 100 \mathrm{km}$, a viscous channel between $T_1$ and $T_2 = 200 \mathrm{km}$ and a viscous halfspace starting at $T_2$. This represents a homogenous case. For heterogeneous ones, simply make lb::Vector{Matrix}
, lv::Vector{Matrix}
such that the vector elements represent the lateral variability of each layer on the grid of Omega::ComputationDomain
.
FastIsostasy.ReferenceState
— TypeReferenceState
Return a struct containing the reference state.
FastIsostasy.CurrentState
— TypeCurrentState
Return a mutable struct containing the geostate which will be updated over the simulation. The geostate contains all the states of the [FastIsoProblem
] to be solved.
FastIsostasy.FastIsoTools
— TypeFastIsoTools(Omega, c, p)
Return a struct
containing pre-computed tools to perform forward-stepping of the model. This includes the Green's functions for the computation of the lithosphere and geoid displacement, plans for FFTs, interpolators of the load and the viscosity over time and preallocated arrays.
FastIsostasy.SolverOptions
— TypeOptions
Return a struct containing the options relative to solving a FastIsoProblem
.
FastIsostasy.OceanSurfaceChange
— TypeOceanSurfaceChange(; z0 = 0.0)
Return a mutable struct OceanSurfaceChange
containing:
z_k
: the GMSL at current time stepk
.A_k
: the ocean surface at current time stepk
.z
: a vector of GMSL values used as knots for interpolation.A
: a vector of ocean surface values used as knots for interpolation.A_itp
: an interpolator of ocean surface over depth. Bias-free for present-day.A_pd
: the present-day ocean surface.res
: residual of the nonlinear equation solved numerically.
An osc::OceanSurfaceChange
can be used as function to update osc.z_k
and osc.A_k
based on osc.A_itp
and an input delta_V
by running:
osc(delta_V)
FastIsostasy.FastIsoProblem
— TypeFastIsoProblem(Omega, c, p, t_out)
FastIsoProblem(Omega, c, p, t_out, Hice)
FastIsoProblem(Omega, c, p, t_out, t_Hice, Hice)
Return a struct containing all the other structs needed for the forward integration of the model over Omega::ComputationDomain
with parameters c::PhysicalConstants
and p::LayeredEarth
. The outputs are stored at t_out::Vector{<:AbstractFloat}
.
Mechanics
FastIsostasy.solve!
— Methodsolve!(fip)
Solve the isostatic adjustment problem defined in fip::FastIsoProblem
.
FastIsostasy.init
— Functioninit(fip)
Initialize an ode::CoupledODEs
, aimed to be used in step!
.
FastIsostasy.step!
— Functionstep!(fip)
Step fip::FastIsoProblem
over tspan
and based on ode::CoupledODEs
, typically obtained by init
.
FastIsostasy.update_diagnostics!
— Functionupdate_diagnostics!(dudt, u, fip, t)
Update all the diagnotisc variables, i.e. all fields of fip.now
apart from the displacement, which requires an integrator.
FastIsostasy.lv_elva!
— Functionlv_elva!(dudt, u, fip, t)
Update the displacement rate dudt
of the viscous response according to LV-ELVA.
FastIsostasy.update_elasticresponse!
— Functionupdate_elasticresponse!(fip::FastIsoProblem)
Update the elastic response by convoluting the Green's function with the load anom. To use coefficients differing from [Farrell1972], see FastIsoTools.
Parameter inversion
FastIsostasy.InversionConfig
— TypeInversionConfig
Struct containing configuration parameters for a [InversionProblem
].
Need to choose regularization factor α ∈ (0,1], When you have enough observation data α=1: no regularization
update_freq 1 : approximate posterior cov matrix with an uninformative prior 0 : weighted average between posterior cov matrix with an uninformative prior and prior
FastIsostasy.InversionData
— TypeInversionData
Struct containing data (either observational or output of a golden standard model) for a [InversionProblem
].
FastIsostasy.InversionProblem
— TypeInversionProblem
Struct containing variables and configs for the inversion of Solid-Earth parameter fields. For now, only viscosity can be inverted but future versions will support lithosphere rigidity. For now, the unscented Kalman inversion is the only method available but ensemble Kalman inversion will be available in future.
FastIsostasy.solve!
— Methodsolve!(paraminv::InversionProblem)
Return priors
and ukiobj
that allow to extract the results of the parameter inversion as initialized in paraminv
.
Convenience
FastIsostasy.load_dataset
— Functionload_dataset(name) → (dims), field, interpolator
Return the dims::Tuple{Vararg{Vector}}
, the field<:Array
and the interpolator
corresponding to a data set defined by a unique name::String
. For instance:
(lon180, lat, t), Hice, Hice_itp = load_dataset("ICE6G_D")
Following options are available for parameter fields:
- "ICE6GD": ice loading history from ICE6GD.
- "Wiens2022": viscosity field from (Wiens et al. 2022)
- "Lithothickness_Pan2022": lithospheric thickness field from (Pan et al. 2022)
- "Viscosity_Pan2022": viscosity field from (Pan et al. 2022)
Following options are available for model results:
- "Spada2011"
- "LatychevGaussian"
- "LatychevICE6G"
FastIsostasy.reinit_structs_cpu
— Functionreinit_structs_cpu(Omega, p)
Reinitialize Omega::ComputationDomain
and p::LayeredEarth
on the CPU, mostly for post-processing purposes.
FastIsostasy.write_out!
— Functionwrite_out!(fip::FastIsoProblem)
Write results in output vectors if the load is updated internally. If the load is updated externally, the user is responsible for writing results.
FastIsostasy.savefip
— Functionsavefip(filename, fip; T = Float32)
Save the output of fip::FastIsoProblem
as NetCDF file under filename
.